
Impaired cellular bioenergetics caused by gba1 depletion sensitizes neurons to calcium overload
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ABSTRACT Heterozygous mutations of the lysosomal enzyme glucocerebrosidase (_GBA1_) represent the major genetic risk for Parkinson’s disease (PD), while homozygous _GBA1_ mutations cause
Gaucher disease, a lysosomal storage disorder, which may involve severe neurodegeneration. We have previously demonstrated impaired autophagy and proteasomal degradation pathways and
mitochondrial dysfunction in neurons from _GBA1_ knockout (_gba1__−/−_) mice. We now show that stimulation with physiological glutamate concentrations causes pathological [Ca2+]c responses
and delayed calcium deregulation, collapse of mitochondrial membrane potential and an irreversible fall in the ATP/ADP ratio. Mitochondrial Ca2+ uptake was reduced in _gba1_−/− cells as was
expression of the mitochondrial calcium uniporter. The rate of free radical generation was increased in _gba1_−/− neurons. Behavior of _gba1__+/−_ neurons was similar to _gba1__−/−_ in terms
of all variables, consistent with a contribution of these mechanisms to the pathogenesis of PD. These data signpost reduced bioenergetic capacity and [Ca2+]c dysregulation as mechanisms
driving neurodegeneration. SIMILAR CONTENT BEING VIEWED BY OTHERS MITOCHONDRIAL OXIDANT STRESS PROMOTES Α-SYNUCLEIN AGGREGATION AND SPREADING IN MICE WITH MUTATED GLUCOCEREBROSIDASE Article
Open access 11 December 2024 LYSOSOMAL LIPID ALTERATIONS CAUSED BY GLUCOCEREBROSIDASE DEFICIENCY PROMOTE LYSOSOMAL DYSFUNCTION, CHAPERONE-MEDIATED-AUTOPHAGY DEFICIENCY, AND ALPHA-SYNUCLEIN
PATHOLOGY Article Open access 06 October 2022 DYSREGULATION OF MITOCHONDRIA-LYSOSOME CONTACTS BY _GBA1_ DYSFUNCTION IN DOPAMINERGIC NEURONAL MODELS OF PARKINSON’S DISEASE Article Open access
22 March 2021 INTRODUCTION The _GBA1_ gene encodes for the lysosomal enzyme glucocerebrosidase (GBA1), which hydrolyzes the lipid glucosylceramide [1]. Homozygous mutations in _GBA1_ cause
an inherited lysosomal storage disease known as Gaucher disease (GD) [2], while heterozygous mutations in _GBA1_ are the major known genetic risk factor for Parkinson’s disease (PD) [3,4,5].
GD presents with a spectrum of symptoms and is classified into three ‘types’: [6] while type I shows limited or late CNS involvement, type II presents with a severe and progressive
neurodegeneration, and type III with less severe, chronic neurological symptoms. PD signs and symptoms include resting tremors, bradykinesia, and rigidity; anosmia, depression, and anxiety,
and at later stages, dementia. The links between specific GBA1 mutations and phenotype remain unclear [6, 7]. Both PD and lysosomal storage diseases such as GD are characterized by
dysfunction of the autophagy/lysosomal pathway and impaired mitochondrial function [8, 9], suggesting that deficiencies in each of these pathways can affect the other [10]. We have
previously shown that, in neurons from _gba1__−/−_ mice, autophagy is impaired upstream of the lysosome, associated with profoundly impaired mitochondrial function, decreased mitochondrial
membrane potential (Δψm), reduced mitochondrial respiration, and especially a dramatic decrease in uncoupled maximal respiratory capacity [11]. Interestingly, _gba1__+/−_ neurons showed a
modest reduction in Δψm, reflecting the absence of symptoms in the _gba1__+/−_ mice compared with _gba1__−/−_ [12]. The mechanism linking mitochondrial dysfunction to the underlying primary
defect in lysosomal biology remains unresolved but may be attributable to the accumulation of dysfunctional mitochondria due to impaired mitochondrial quality control pathways. This has also
been described in other lysosomal storage diseases (reviewed in [8]). Mitochondria show an intimate and complex relationship with calcium signaling, representing a major intersection
between cellular bioenergetics and cell signaling pathways [13,14,15]. Mitochondria take up Ca2+ from the cytosol, in a process mediated by the mitochondrial Ca2+ uniporter (MCU) complex
[16], its regulatory proteins [17,18,19], and balanced by the mitochondrial Ca2+ efflux pathway [20]. Dysregulation of [Ca2+]c signaling has been implicated widely in neurodegeneration and
has been identified as a key pathway in the selective degeneration of dopaminergic neurons in PD [21, 22]. We therefore explored the interplay between [Ca2+]c homeostasis and mitochondrial
bioenergetic capacity as potential contributors the neurodegeneration associated with _GBA1_ depletion, studying [Ca2+]c signaling in primary neuronal cultures from _gba1__−/−_, _gba1__+/−_,
and _gba1__+/+_ mice, stimulated with glutamate at physiological concentrations that are innocuous to control neurons (10 μM or below). As Ca2+-dependent mitochondrial dysfunction is
exacerbated by oxidative stress [15, 23], we also explored changes in free radical production associated with _GBA1_ depletion. We found that in both _gba1__−/−_ and _gba1__+/−_ neurons,
exposure to physiological glutamate concentrations caused delayed calcium deregulation (DCD), loss of Δψm and bioenergetic failure. Intriguingly, MCU protein expression was downregulated in
_gba1__−/−_, associated with a reduced mitochondrial Ca2+ buffering capacity. Very importantly, _gba1__+/−_ neurons, which model to a certain extent the heterozygous _GBA1_ mutations found
in PD patients, behaved similarly to _gba1__−/−_. These findings emphasize the fundamental importance of mitochondrial bioenergetic capacity in maintaining neuronal energy homeostasis in the
face of increased energetic demand associated with activity. Our data demonstrate the vulnerability of neurons in which mitochondrial function is perturbed to cellular [Ca2+]c overload,
suggesting that increased sensitivity to physiological glutamate concentrations may play an important role in neurodegeneration in GD and possibly also in GBA1-related PD. METHODS AND
MATERIALS MOUSE MODEL AND ANIMAL WELFARE Mice used for this work were described in Enquist et al. [12]. As K14-wt, K14-lnl/wt (lox/neomycin/lox), and K14-lnl/lnl and are herein referred as
_gba1__+/+_, _gba1__+/−_, and _gba1__−/−_. Mouse welfare was approved by the University College London Animal Welfare and Ethical Review Board (AWERB) and in accordance with personal
licenses granted by the UK Home Office and the Animal (Scientific Procedures) Act of 1986. The colony was maintained using breeding pairs heterozygous for GBA1 and pups were euthanized at P0
using cervical dislocation followed by decapitation for primary neuronal cultures preparation and liver extraction for genotyping. MOUSE GENOTYPING Genomic DNA was extracted from liver for
each pup (P0) using DNeasy Blood & Tissue Kit (Qiagen), genotyped by PCR using Q5 High Fidelity DNA Polymerase (NEB) and the following primers: GCex8-2 (Sigma, USA)
GTACGTTCATGGCATTGCTGTTCACT METex8-2 (Sigma, USA) ATTCCAGCTGTCCCTCGTCTCC NEO-AO2 (Sigma, USA) AAGACAGAATAAAACGCACGGGTGTTGG PCR was performed on T100 Thermal cycler (Biorad) using the
following PCR cycling conditions. Bands were visualized by gel electrophoresis. 98 °C 30 s ×15 98 °C 10 s 63 °C (0.5 °C touchdown) 30 s 72 °C 1.30 min 98 °C 10 s ×25 61 °C 30 s 72 °C 1.30
min 72 °C 5 mins 10 °C Hold NEURONAL AND ASTROCYTE PRIMARY CULTURE Mixed cultures of cortical neurons and astrocytes were obtained by dissecting brains from P0-P1 mice. Cortices from
each brain were isolated, kept in HBSS (H6648, Sigma) on ice separated from each other and genotyping was performed on liver extracted from each pup. Brain tissue was incubated in EBSS
(E2888, Sigma) and papain (LK003178, Worthington Biochemical Corp.) for 40 min at 37 °C and it was then dissociated by trituration in EBSS supplemented with DNAse (LK003172, Worthington
Biochemical Corp.) and papain inhibitor (LK003182, Worthington Biochemical Corp.). After spinning, the cell pellet was resuspended in Neurobasal (21103-049, Life Technologies), supplemented
with B27 (17504-044, Life Technologies), Glutamax (35050-038, Life Technologies), and 100 U/ml Penicillin–Streptomycin (1514-122, Life Technologies) counted and plated to appropriate
densities on coverslips (0.5·106 cells), 6-well plates (106 cells) or 96-well plates (30000 cells), coated with polylysine (P4707, Sigma). Half media changes were done every 4 or 7 days.
Cultures were maintained at 37 °C and 5% CO2 in humidified atmosphere and used between 10 and 15 days in vitro unless stated differently. CYTOSOLIC CALCIUM IMAGING Primary neurons and
astrocytes in mixed cultures were seeded onto 22-mm coverslips (or on 35mm FluoroDishes™ (Fisherscientific)) and stained with 5 μM FuraFF or Fura2 (F14181 and F1221, Thermo Fisher
Scientific) in recording buffer (150 mM NaCl, 4.25 mM KCl, 4 mM NaHCO3, 1.25 mM NaH2PO4, 1.2 mM CaCl2, 10 mM D-glucose, and 10 mM HEPES at pH 7.4) with pluronic acid 0.02%, at 37 °C and 5%
CO2 for 30 min. After washing, cells were imaged in recording buffer using a custom-made imaging widefield system built on an IX71 Olympus microscope equipped with a 20× water objective. A
Xenon arc lamp with a monochromator was used for excitation, exciting FuraFF or Fura2 fluorescence alternately at 340 nm ± 20 nm and 380 nm ± 20 nm and collecting emitted light through a
dichroic T510lpxru or a 79003-ET Fura2/TRITC (Chroma), and a band-pass filter 535/30 nm. Images were acquired using a Zyla CMOS camera (Andor) every 2–4 s and neurons were stimulated using
10 μM glutamate (G1626, Sigma). A total of 2 μM ionomycin was added at the end of each time course as a positive control. Electrical stimulation experiments were performed using a ‘myopacer’
(Ionoptix, Westwood USA) electrical stimulator and custom-made platinum electrodes (settings were: 40 V, 5 Hz 40 msec pulses and each stimulation period lasted 10 s). Activation of
metabotropic glutamate receptors was achieved by challenging neurons with 100 μM quisqualate (Q2128, Sigma), while inhibiting NMDA and AMPA/kainate receptors using 10 μM (2
R)-amino-5-phosphonopentanoate (D-AP5) (0106/100, Bio Techne Ltd) and 20 μM CNQX (HB0205, HelloBio), respectively. Images were analyzed using ImageJ by selecting regions of interest (ROI) in
each cell and measuring average fluorescence intensity in the ROIs for each channel. After background subtraction, ratios between the signal excited at 380 nm and at 340 nm were calculated
at each time point and the resulting 340/380 ratioed traces representing cytosolic [Ca2+]c levels upon stimulation were plotted. Peak amplitude values were calculated for each cell using
Microsoft Excel and GraphPrism. RHODAMINE123 IMAGING Mixed cultures of primary neurons and astrocytes seeded on 22-mm coverslips were labeled with 10 μg/ml Rhodamine123 (R8004, Sigma) in
recording buffer, at 37 °C and 5% CO2 for 20 min. After washing, cells were imaged in recording buffer using a Zeiss 880 confocal microscope equipped with a 40× oil objective, exciting
neurons at 488 nm and collecting light longer than 505 nm. Images were acquired every 20 s with low laser power to avoid light-induced mitochondrial depolarization and photobleaching.
Neurons were stimulated using 10 μM glutamate (G1626, Sigma) and 1 μM Carbonyl cyanide 4-(trifluoromethoxy)phenylhydrazone (FCCP) (C2920, Sigma) was added at the end of the time course to
evaluate the Rhod123 fluorescence intensity corresponding to 100% depolarization. Images were analyzed using ImageJ by selecting ROI in each field and measuring average fluorescence
intensity in the ROIs. For each trace, the signal was normalized between basal (the minimum value of intensity set to 0%) while the fully depolarized signal was set as the intensity of the
maximal data point, representing complete depolarization, at 100%. Cumulative frequency distribution analysis was also performed as for the measurements of [Ca2+]c. WESTERN BLOTTING Brains
tissue dissection was performed at P0-P1 and samples were snap frozen in liquid nitrogen and stored at −80 °C. To extract soluble proteins, brain tissue was homogenized in RIPA buffer (150
mM NaCl, 0.5% Sodium deoxycholic acid, 0.1% SDS, 1% Triton X-100, 50 mM Tris pH 8.0, 1 mM PMSF (93482, Sigma)) and incubated 30 min on ice. After incubation, lysates were centrifuged and the
soluble fraction was collected to quantify protein concentration by Pierce BCA Protein Assay Kit (23225, Thermo Scientific). Sample buffer 4× with 2% beta-meracapto ethanol was added to
30–50 ug of total proteins, samples were boiled and loaded onto a Nu-Page gel (4–12% or 12%) (NP0335 and NP0341, Invitrogen) using MOPS or MEF buffer (NP001 or NP002, Invitrogen). Gels were
transferred to 0.45 μm PVDF membranes (IPVH00010, Millipore) in transfer buffer (NP0006, Invitrogen) with 20% methanol using a semi-dry system (Invitrogen). After blocking in 5% milk T-TBS
buffer (20 mM Tris, 150 mM NaCl pH 7.4, and 0.1% Tween 20), membranes were probed with primary antibodies (MCU, HPA016480 Sigma; EMRE, sc-86337 Santa Cruz; SOD1, sc-8637 Santa Cruz; SOD2,
sc-137254 Santa Cruz; grp75, sc-1058 Santa Cruz; β-actin, A2228 Sigma; MICU2, ab101465 Abcam; MCURI, ab86335, Abcam; GRIN2b, AGC-003 Alomone labs; GRIK2, AGC-009 Alomone labs;
Phospho-p40phox (Thr154), #4311 Cell Signaling Technology) overnight at 4 °C, washed and probed with an appropriate HRP-conjugated secondary antibody (anti-rabbit, 31463 Thermo Fisher
Scientific; anti-mouse, 31457 Thermo Fisher Scientific; anti-goat, A5420 Sigma) for 1 h at room temperature. Visualization was performed using Luminata Forte Western HRP substrate
(WBLUF0100, Millipore) and Chemidoc imaging system (Biorad). ATP:ADP MEASUREMENTS USING PERCEVALHR AND CONFOCAL IMAGING A total of 30,000–50,000 neurons were plated in 96-well plates with
clear bottom and transfected with the ATP:ADP sensor PercevalHR [24] at DIV8 using Lipofectamine LTX (15338-030, Life Technologies) in Optimem (31985-047, Life Technologies) for 1 h.
Conditioned media were kept and used to replace Optimem after transfection. After 48–72 h, imaging of single neurons expressing PercevalHR was performed in recording buffer exciting
PercevalHR at 405 nm and at 488 nm and collecting light at wavelengths longer than 510 nm, using a Zeiss 880 confocal microscope. Images were acquired every 10 s and neurons were stimulated
using 10 μM glutamate (G1626, Sigma) at 200 s. ATP:ADP ratios over time were obtained drawing ROIs in each neuron, measuring average fluorescence intensity in the ROIs for each channel in
ImageJ and calculating the 488 nm/405 nm ratio. MITOCHONDRIAL CALCIUM MEASUREMENT USING MITOCHONDRIAL-AEQUORIN A total of 30,000–50,000 mixed neurons and astrocytes were plated and grown
onto white 96-well plates, transduced with mtAequorin adenovirus [25] at DIV7–8 and incubated for 48–72 h. Afterward, media was replaced with 5 µM coelenterazine in Krebs Ringer Buffer (125
mM NaCl, 5.5 mM D-Glucose, 5 mM KCl, 20 mM HEPES, 1 mM Na3PO4, 1 mM Glutamine, 100 mM Pyruvate, and 1.2 mM CaCl2). The plate was then incubated in the dark for 2 h at 37 °C. Luminescence
measurements were obtained using a plate reader (FluoStar Optima, BMG Labtech) every 1 s after 10 µM glutamate stimulation at 5 s. A total of 100 µM Digitonin was added at 25 s.
Mitochondrial Ca2+ concentrations were calculated as previously described [25]. MEASUREMENT OF RATES OF ROS GENERATION Mixed neurons and astrocytes plated on coverslips were imaged in
recording buffer using a Zeiss 510 confocal microscope, equipped with a UV laser (Coherent). 5 μM dihydroethidium (DHE, D1168 Thermo Fisher Scientific) was added to recording buffer after
starting the acquisition. Reduced DHE was excited at 351 nm and emitted light was recorded between 435 and 485 nm; oxidized DHE was excited at 543 nm and emitted light was collected using a
560-nm long-pass filter. Images were acquired over time every 8.93 s and 10 μM glutamate was added at 600 s to measure changes induced by glutamate stimulation in oxidation rates. Oxidation
rate curves were obtained calculating the ratio between reduced and oxidized DHE. Basal oxidation levels (basal slopes) were calculated considering the difference between ratio at 500 s and
the ratio at the beginning of the time course and dividing it by the time duration. Glutamate-induced oxidation rates were calculated as the difference between ratios at 1000 s and at 500 s
and dividing it by the time duration (glutamate slopes). MEASUREMENT OF GLUTATHIONE LEVELS USING MONOCHLOROBIMANE (MBC) Monocholorobimane (M1381MP, Invitrogen) imaging experiments were
performed further adapting a protocol set for neurons [26]. Briefly, neurons plated on coverslips as previously described and were incubated with 100 μM MCB in recording buffer until a
steady state was achieved. Images were acquired using a custom-made widefield imaging system built on an IX71 Olympus microscope equipped with a 20× water objective. A Xenon arc lamp with a
monochromator was used for excitation set at 380 nm and collecting emitted light through a dichroic mirror 79001-ET Fura2 (Chroma) and a band-pass emission filter at 525/36 nm, using a Zyla
CMOS camera (Andor). For image analysis, ROIs were then chosen and average MCB intensity for each neuron was calculated as an average of last three frames of the plateau and plotted in a
scatter plot. IMMUNOCYTOCHEMISTRY AND CONFOCAL IMAGING Neurons were plated on 96-well plates as previously described and grown until DIV12-14. Cells were then washed in PBS and fixed using
4% paraformaldehyde (P6148, Sigma) for 30 min at room temperature and then washed again. Blocking was performed by incubation with 3% Bovine Serum Albumin (A2153, Sigma) in PBS and staining
using a primary antibody against an extracellular epitope of Grin2b (AGC-003, Alomone labs) and a secondary anti-rabbit Alexa488 (Thermo Fisher Scientific). Nuclei were stained with Hoechst
33342 and images were then collected by exciting Alexa488 at 488 nm and Hoechst at 405 nm, using a 60× objective and a Zeiss 880 confocal microscope. MRNA EXTRACTION AND QPCR mRNA was
extracted from brain tissue using ReliaPrep™ RNA Cell Miniprep (Z6010, Promega); mRNA concentration was measured and 500 ng mRNA was used to obtain cDNA by means of the GoScript™ Reverse
Transcription Kit (A5000, Promega), following manufacturer instructions. The obtained cDNA was subjected to qPCR using SYBR® Green JumpStart Taq ReadyMix (S4438, Sigma) and CFX96 Real-Time
System (Biorad). Different pairs of primers where then used to quantify the mRNA expression levels of genes of interest: Cyclophilin A F 5′-CCCACCGTGTTCTTCGACA-3′ Cyclophilin A R
5′-CCAGTGCTCAGAGCTCGAAA-3′ GRIK2 F5′-TGTGGAATCTGGCCCTATGG-3′ GRIK2 R5′-TGAACTGTGTGAAGGACCGA-3′ Grin2b F 5′-CGCCCAGATCCTCGATTTCA-3′ Grin2b R5′-CTGGAAGAACATGGAGGACTCA-3′ MCU
F5′-GTCAGTTCACACTCAAGCCTAT-3′ MCU R 5′-TTGAAGCAGCAACGCGAACA-3′ MCURI F 5′-CTTCTGGGAGCAGGAAACTCTA-3′ MCURI R 5′-TGAGTAGCAAACCCATTGTC-3′ MICU1 F5′-GCTCCATAACGCCCAATGAG-3′ MICU1
R5′-GAAGGAGATGAGCCCACACT-3′ LIPID EXTRACTION AND LIPIDOMICS ANALYSIS Lipids were extracted from brains (dissections performed on newborn pups, _n_ = 3 per genotype) using Folch extraction
(chloroform:methanol = 2:1) and were analyzed, as previously described [27]. In this configuration, measurements of GBA1 substrate are not able to differentiate between the combined
glycosylceramides, and therefore include both glucosylceramides and galactosylceramides. STATISTICAL ANALYSIS Image quantification was performed using ImageJ and data were analyzed using
GraphPad Prism. When the number of data points (usually corresponding to cell number) was >150 (_n_ = 3 independent experiments), distribution analysis was performed (frequency
distribution or cumulative frequency distribution), while when the number of data points was lower mean ± SD or mean ± SEM were used, representing single data points on graphs to properly
account for data variability. Tests of normality were performed (Shapiro–Wilk test) to identify normal or non-normal populations. When normal, Student’s test or Anova tests (Bonferroni
post-test) were used as needed, otherwise the nonparametric Kruskal–Wallis test (Dunns post-test) was used. The chosen tests are clearly indicated in the figure legends; *_p_ < 0.05,
**_p_ < 0.01, and ***_p_ < 0.001. RESULTS _GBA1_ +/− AND _GBA1_ _−/−_ NEURONS SHOW DELAYED CALCIUM DEREGULATION IN RESPONSE TO 10 ΜM GLUTAMATE CONCENTRATIONS Mixed cultures of neurons
and astrocytes were loaded with the low-affinity [Ca2+]c indicator FuraFF-AM and images were acquired over time. Exposure to 10 μM glutamate (Fig. 1a) caused the expected rise in [Ca2+]c,
but responses clearly differed between _gba1__+/+_, _gba1__+/−_, and _gba1__−/−_ neurons. Both the early peak response, (ΔfuraFFearly) and responses at later time points differed
significantly between genotypes (Fig. 1bii and dii). Cumulative frequency distributions revealed a significant increase in the amplitude of the early glutamate response in both _gba1__−/−_
and _gba1__+/−_ neurons, compared with controls (Fig. 1bi, _n_ = 3 mice per genotype, _N_ = 30–60 cells per genotype per experiment). In the continued presence of glutamate, the initial
transient response was followed in the majority of _gba1__−/−_ cells by a delayed increase in [Ca2+]c, referred to as DCD, a characteristic response to toxic glutamate concentrations (100 μM
or higher) in control cells [28, 29]. At 10 μM glutamate, DCD was seen in very few control cells, but was a feature of the majority of _gba1__−/−_ cells, while _gba1__+/−_ cells showed an
intermediary response (Fig. 1a–c). The cumulative frequency distribution of the delayed response (ΔfuraFFDCD—Fig. 1di) and the scatter plot of the [Ca2+]c response at 400 s after glutamate
exposure (Fig. 1dii) indicated the percentage of neurons showing DCD (defined as ΔfuraFF > 0.1 ratio unit). In _gba1__+/−_ and in _gba1__−/−_ cultures, about 53 and 60% of the neurons
showed DCD, respectively, while this was seen in only 20% of neurons in _gba1__+/+_ cultures (Fig. 1d, _n_ = 3 mice per genotype, _N_ = 40–60 cells per genotype per experiment). Neuronal
responses to 1 μM glutamate, at the lower limit of the physiological range [30], also showed differences between genotypes consistent with these data (Supplementary Fig. 1A). [Ca2+]c
remained elevated 400 s after 1 μM glutamate in 10–15% of _gba1__+/−_ and _gba1__−/−_ neurons but only in 1% of _gba1__+/+_ neurons. In order to determine whether responses to Ca2+ signals
arising from different sources also showed deregulation, we explored responses to release ER Ca2+ by metabotropic glutamate receptors and to electrical pacing, promoting Ca2+ influx through
voltage-gated Ca2+ channels. Ionotropic receptors were inhibited using 10 μM D-AP5 and 20 μM CNQX and neurons challenged with 100 μM quisqualate, a group I metabotropic receptor agonist
[31]. Only very small responses were detectable using the low-affinity FuraFF (Supplementary Fig. 2A). Experiments with the higher affinity indicator Fura-2, revealed a small but significant
reduction in the [Ca2+]c peak response to quisqualate in _gba1__−/−_ neurons (Supplementary Fig. 2B-C). Responses to electrical pacing were undetectable using FuraFF, while measurements
with Fura-2 revealed no significant differences in peak responses between genotypes (Supplementary Fig. 2D). Altogether, these data show that DCD is a response only to Ca2+ influx through
ionotropic pathways, probably reflecting the much greater Ca2+ load that this represents. INCREASED SENSITIVITY OF _GBA1_ +/− AND _GBA1_ _−/−_ NEURONS TO GLUTAMATE IS NOT DUE TO DIFFERENT
EXPRESSION OF GLUTAMATE RECEPTORS The increased sensitivity to glutamate could reflect altered expression of ionotropic glutamate receptors. The ionotropic glutamate NMDA receptor subunit 2B
(_Grin2b_) and the ionotropic kainate receptor subunit 2 (_Grik2_) are both lifespan modifier genes in GWAS studies of mouse strains treated with the GBA1 inhibitor, Conduritol B Epoxide
(CBE) [32]. _Grin2b_ mRNA expression is higher in mouse strains in which lifespan is shortened following CBE treatment, suggesting that expression of the glutamate receptor is increased as a
secondary effect of GBA1 inhibition and sensitizes the cells. We therefore measured expression levels of mRNA for _Grin2b_ and for _Grik2_ in _gba1__+/+_, _gba1__+/−_, and _gba1__−/−_ mouse
brains by qPCR. mRNA levels of _Grik2_ were slightly higher for _gba1__+/−_ neurons compared with the other genotypes, while _Grin2b_ mRNA levels showed a small but significant decrease in
_gba1__+/−_ and _gba1__−/−_ compared with _gba1__+/+_ (Fig. 2a). However, western blots of brain lysates to quantify Grik2 and Grin2b protein levels (Fig. 2b) (_n_ = 4–5 per genotype)
revealed no significant difference among genotypes. Surface analysis for Grin2b by immunofluorescence [33] and confocal imaging also failed to reveal any significant differences between them
(Supplementary Fig. 3). Thus, the increased glutamate sensitivity and DCD is not a consequence of increased glutamate receptor expression. As DCD is a predictor of neuronal cell death [34,
35], these data show that _gba1__−/−_ and _gba1__+/−_ neurons are more vulnerable to glutamate-induced [Ca2+]c overload than the _gba1__+/+_. LIPID HOMEOSTASIS IS DIFFERENTIALLY ALTERED IN
THE BRAIN OF _GBA1_ _+/−_ AND _GBA1_ _−/−_ MICE The loss of GBA1 is expected to cause accumulation of its substrate glucosylceramide. Mass spectrometry analysis of lipids extracted from
_gba1__+/+_, _gba1__+/−_, and _gba1__−/−_ brains generates measurements of glycosylceramide, which corresponds to both glucosylceramide and galactosylceramide. The resulting data showed
accumulation of glycosylceramides only in _gba1__−/−_ but not in _gba1__+/−_ brains, suggesting that one copy of the gene may generate sufficient enzyme to minimize substrate accumulation
(Fig. 2b). However, it is important to emphasize that smaller increases in glucosylceramide levels in _gba1__+/−_ brains may have been masked when measured together with galactosylceramide,
because the latter are more abundant in subpopulations of cells in the brain. In fact, heterozygous GBA pure neurons may present glucosylceramide accumulation [36, 37]. Noteworthy, saturated
glycosylceramides (d18:0) were not elevated even in _gba1__−/−_ cells. Interestingly, other secondary substrates may also be implicated. For example, glycosphingosine accumulation occurs in
GD models and in patients with GD [38,39,40], and even if this does not seem to occur in _gba1__+/−_ neurons [40], we cannot exclude a contribution from changes in overall lipid metabolism.
Levels of ceramides, products of the GBA1 enzymatic activity, were not affected by the knockout, suggesting activation of compensatory pathways (Fig. 2e). Phosphatidylcholine (PC), lyso-PC,
and sphingomyelin were also unaffected (Fig. 2f–h), while phosphatidylethanolamine (PE) and phosphatidylserine (PS), which are important for mitochondrial function and for regulation of
autophagy [41,42,43,44], were both upregulated in _gba1__−/−_ brains compared with _gba1__+/+_ (Fig. 2i–l). PS was increased also in _gba1__+/−_ brains, further suggesting that this pathway
may contribute to the neuronal pathophysiology. LOW GLUTAMATE CONCENTRATIONS CAUSE LOSS OF MITOCHONDRIAL MEMBRANE POTENTIAL IN _GBA1_ +/− AND _GBA1_ _−/−_ NEURONS The [Ca2+]c increase in DCD
associated with glutamate excitotoxicity is closely coupled to collapse of Δψm and attributed to impaired [Ca2+]c homeostasis due to ATP depletion and the resultant failure of Ca2+
extrusion from the cytoplasm by Ca2+-H+ ATPases [29, 45], but this has not been demonstrated in a disease model. To further explore the relationship between mitochondrial (dys)function and
DCD, we used Rhodamine123, in ‘dequench mode’ [46], to study time-dependent changes in Δψm following exposure to glutamate. After an initial transient depolarization, coincident with the
initial [Ca2+]c response to glutamate, Δψm recovered almost to the baseline in the majority of _gba1__+/+_ neurons, while in _gba1__+/−_ and _gba1__−/−_ cells a large proportion of cells
showed a delayed collapse of Δψm (Fig. 3a). The secondary depolarization, quantified as the percentage change in the normalized Rhodamine123 signal at 400 s after glutamate stimulation (see
methods) was significantly different between genotypes (Fig. 3b): only 23% of the _gba1__+/+_ neurons presented at least 50% change of signal 400 s after 10 μM glutamate stimulation, while
an equivalent depolarization was seen in 42% of the _gba1__+/−_ and 43% of the _gba1__−/−_ neurons, closely resembling the distribution of the DCD responses. These measurements confirm the
close coupling between collapse of Δψm and DCD that we have previously described in other models [29]. INCREASED SENSITIVITY TO GLUTAMATE REFLECTS IMPAIRED CAPACITY TO MAINTAIN ATP
HOMEOSTASIS IN _GBA1_ +/− AND _GBA1_ _−/−_ NEURONS The appearance of DCD in response to low glutamate concentrations strongly resembles the glutamate response of neurons following inhibition
of oxidative phosphorylation by oligomycin [34, 45, 47] suggesting that glutamate-induced DCD reflects bioenergetic insufficiency in _gba1__+/−_ and _gba1__−/−_ neurons. We therefore
measured dynamic changes in neuronal ATP:ADP ratios in response to glutamate. Neurons were transfected with the ratiometric fluorescent probe PercevalHR, which reports changes in cytosolic
ATP:ADP [24]. Most neurons responded to glutamate with a rapid decrease in the ATP:ADP ratio (Fig. 4a), reported by the probe as a decrease in the ATP sensitive signal and an increase in the
ADP sensitive signal (Supplementary Fig. 4). The ATP:ADP ratio recovered over a few minutes in most control cells, but recovery was much slower or absent in the _gba1__−/−_ and to a lesser
extent in the _gba1__+/−_ neurons. Quantifying the ATP:ADP ratios before glutamate exposure, immediately after and 200 s after 10 µM glutamate stimulation (Fig. 4b–d), showed that there were
no significant differences between basal ATP:ADP ratios (before normalization) among the different genotypes (Fig. 4b), and the initial drop in ATP:ADP ratio was significantly higher in
_gba1__−/−_ neurons compared with wild-type (Fig. 4c). Moreover, recovery to the baseline was markedly impaired in both _gba1__+/−_ and _gba1__−/−_ cells (Fig. 4d). Interestingly, the same
experiments in control neurons in response to toxic concentrations of glutamate (100 μM) (Supplementary Fig. 5), showed an initial decrease in the ATP:ADP ratio, followed by a partial
recovery before undergoing a secondary decrease. This behavior was quite distinct from the responses seen in _gba1__+/−_ and _gba1__−/−_ neurons upon 10 μM glutamate stimulation. However,
when control neurons were treated first with 1 μM oligomycin, to inhibit oxidative phosphorylation, their responses to 10 μM glutamate resembled the responses of the _gba1__−/−_ neurons,
showing a decrease that failed to recover. These data further suggest that ATP depletion in _gba1__+/−_ and _gba1__−/−_ neurons in response to nontoxic glutamate concentrations is a
consequence of impaired mitochondrial function. These data suggest that even though energy homeostatic mechanisms maintain a normal ATP:ADP ratio at rest, the underlying loss of
mitochondrial bioenergetic capacity undermines the possibility to match ATP production to meet the increased energy demand following glutamate stimulation. MITOCHONDRIAL CALCIUM UPTAKE IS
REDUCED IN _GBA1_ _−/−_ AND IN _GBA1_ _+/−_ NEURONS The increased demand imposed on the cell by a [Ca2+]c signal may be matched by an increased energy supply driven by the upregulation of
the mitochondrial citric acid cycle in response to a rise in intramitochondrial Ca2+ concentration ([Ca2+]m) [48,49,50,51]. We therefore measured changes in [Ca2+]m in response to 10 μM
glutamate directly using mitochondria-targeted aequorin (Fig. 5a). Surprisingly, mitochondrial Ca2+ uptake was significantly reduced in both _gba1__−/−_ and _gba1__+/−_ neurons compared with
_gba1__+/+_. This is especially significant as the initial transient increase in cytosolic [Ca2+] in response to glutamate was increased in the _gba1__+/−_ and _gba1__−/−_ cells (see above,
Fig. 1b), consistent with impaired mitochondrial Ca2+ buffering. Resting cytosolic Ca2+ levels were not significantly different between populations, suggesting that the bioenergetic defect
was not severe enough to impair resting Ca2+ homeostasis (Supplementary Fig. 6). These findings may be attributable to the reduction in Δψm seen in _gba1__−/−_ and _gba1__+/−_ neurons [11].
However, we also explored the expression levels of the components of the mitochondrial Ca2+ uniporter complex, which may also contribute to altered mitochondrial Ca2+ uptake [17, 19,
52,53,54]. MCU, EMRE, MICU2, and MCUR1 protein levels were measured by western blot in brains from _gba1__+/+_, _gba1__+/−_, and _gba1__−/−_ mice (Fig. 5b). Quantification showed that MCU
expression was significantly reduced in the _gba1__+/−_ and _gba1__−/−_ cells, while expression levels of the associated regulatory proteins, EMRE, MICU2, and MCUR1 were not altered (_n_ =
3–5 per genotype). Quantification of mRNA for MCU, EMRE, MICU1, and MCUR1 by qPCR (Supplementary Fig. 7) did not reveal any significant differences (_n_ = 3 per genotype), suggesting that
changes in MCU expression must be post transcriptionally regulated. RATES OF FREE RADICAL PRODUCTION ARE INCREASED IN _GBA1_ _−/−_ NEURONS Ca2+-dependent neuronal injury may be exacerbated
by the conjunction of raised [Ca2+]m with oxidative stress [23]. We therefore used dihydroethidium (DHE), a ratiometric fluorescent reporter sensitive to reactive oxygen species (ROS) to
determine whether basal rates of free radical production differ in _gba1__−/−_ cells (Fig. 6a) [55]. These data showed an increased basal rate of free radical production in _gba1__−/−_ cells
compared with the other genotypes (Fig. 6b). Exposure of cells to 10 μM glutamate caused a significant increase in the rate of ROS generation in each genotype, but the relative change was
not significantly different between _gba1__+/+_, _gba1__+/−_, and _gba1__−/−_ cultures (Fig. 6b) (_n_ = 3 independent experiments, _N_ = 10–20 cells per genotype per experiment). To address
the possibility that the increased rate of resting free radical production in _gba1__−/−_ was associated with impaired antioxidant defenses, we measured the expression of superoxide
dismutases (SODs) and glutathione (GSH) levels. Western blots of cytosolic SOD1 and mitochondrial SOD2 showed no difference between genotypes (_n_ = 5 per genotype) (Fig. 6c). GSH levels
were measured using monochlorobimane (MCB) as previously described [26]. MCB reacts with GSH, generating a fluorescent adduct, so a measure of steady-state MCB intensity gives a measure of
relative GSH content. MCB intensity in _gba1__+/+_, _gba1__+/−_, and _gba1__−/−_ showed no significant difference between genotypes (Fig. 6d—_n_ = 3 independent experiments, _N_ = 35–40
cells per genotype per experiment). DISCUSSION The goal of this study was to evaluate the functional consequences of mitochondrial dysfunction on cell physiology in neurons from the
transgenic _gba1__−/−_ mouse, a model for severe neuropathic GD, and from the _gba1__+/−_ mouse, which may illuminate mechanisms of neurodegeneration in GBA1-related PD. The functional
impact of impaired mitochondrial function is most dramatically revealed in neurons by an impaired capacity to respond to dynamic changes in metabolic demand, such as the increased energy
drain imposed by exposure to glutamate. Exposure of the cells to glutamate at concentrations that are innocuous for wild-type cells caused a profoundly dysregulated response in terms of
[Ca2+]c signaling and mitochondrial metabolism in the _gba1__−/−_ and, to a lesser extent, in the _gba1__+/−_ neurons. The _gba1__−/−_ mice suffer from an aggressive form of
neurodegeneration, and die only 2 weeks after birth [12], while _gba1__+/−_ mice do not show a disease-related phenotype. However, neurons from both _gba1__+/−_ and _gba1__−/−_ show a
significant decrease in Δψm and _gba1__−/−_ mixed cultures of neurons and astrocytes also show reduced basal respiratory activity and massively reduced maximal respiratory capacity [11]. We
found that neurons from both _gba1__−/−_ and _gba1__+/−_ mice showed abnormal responses to 10 μM glutamate, characterized as DCD, which is normally associated with ‘excitotoxicity’ in
response to much higher concentrations of glutamate. We attribute this vulnerability primarily to the decreased bioenergetic capacity, which is especially severe in the _gba1__−/−_ neurons
[11], and therefore to the failure to maintain ATP homeostasis in the face of increased energy demand imposed by glutamate. The decreased mitochondrial Ca2+ uptake that we have shown in both
_gba1__−/−_ and _gba1__+/−_ neurons, will likely contribute to this energetic failure, as it will limit the capacity of the mitochondria to increase ATP production in response to [Ca2+]c
signals. The observed reduction in mitochondrial Ca2+ uptake is attributable to the reduced Δψm but also to the reduced expression of the MCU protein, which seems to be associated with
changes in protein turnover rather than to transcriptional repression. The small reduction of _Grin2b_ mRNA in both _gba1__+/−_ and _gba1__−/−_ brains may represent another compensatory
mechanism, but was not reflected in changes in Grin2b protein expression, or in the localization of Grin2b at the plasma membrane. Thus, changes in Grin2b expression or localization are
unlikely to be responsible for DCD. Furthermore, responses of _gba1__−/−_ neurons to release of ER Ca2+ by metabotropic receptor activation showed a modest reduction, suggesting that the key
Ca2+ source that triggers DCD is delivered through ionotropic glutamate receptors. The response to the Ca2+ influx is likely compounded by an increased rate of ROS generation in _gba1__−/−_
neurons under basal conditions, as glutamate toxicity is exacerbated by oxidative stress [56]. Interestingly, we have found a marked cellular phenotype in _gba1__+/−_ neurons. We previously
showed, that Δψm is reduced in _gba1__+/−_ neurons [11], although defects in respiratory capacity were less severe than in homozygotes. These differences, together with the difference in
oxidative stress, that was increased only in _gba1__−/−_ neurons, may contribute to the difference of disease phenotype in the _gba1__−/−_ and _gba1__+/−_ mice. In agreement with our data, a
mouse model carrying the heterozygous _GBA1_ PD-associated mutation L444P was shown to have defective mitochondria, supporting a role of impaired bioenergetics in GBA1-associated PD [57].
Dopaminergic neurons at risk of neurodegeneration in PD are physiologically characterized by Ca2+-dependent pace-making activity, while intrinsic Ca2+ buffering capacity is reduced [22],
imposing a major energy demand, which will be amplified by mechanisms that compromise bioenergetic reserve, putting these cells especially at risk [58]. Since we have shown that partial
depletion of GBA1 in _gba1__+/−_ neurons sensitizes neurons to Ca2+ influx and show DCD in response to physiological glutamate concentrations, we suggest that the compromised mitochondrial
function in these cells may increase the risk of neurodegeneration in neurons that are already vulnerable because of their normal physiological activity. It is notable that both _gba1__−/−_
and _gba1__+/−_ neurons showed similar responses to glutamate and impaired [Ca2+]c handling, suggesting that it is unlikely that the metabolic and signaling defects are simply attributable
to the massive accumulation of the GBA1 substrate glucosylceramide, observed in _gba1__−/−_, which was evident despite the presence of galactosylceramides. However, subtle changes of
glucosylceramide levels in _gba1__+/−_ brains may have been masked by the higher levels of galactosylceramides in the mixed cells. Considering this and the deregulation observed in PE and PS
levels in _gba1__+/−_ and _gba1__−/−_ brains, broader evaluation of lipid homeostasis may help in understanding the pathophysiological mechanisms that couple reduced GBA1 to mitochondrial
dysfunction. Overall, our findings suggest that _gba1__−/−_ but also _gba1__+/−_ neurons are sensitive to dynamic changes in energy demand caused by an imposed workload, while under basal
conditions, both ATP and cytosolic Ca2+ levels in _gba1__−/−_ and _gba1__+/−_ neurons were not different from the control. This implies the activity of a vicious cycle in which every
mechanism enlisted to compensate a homeostatic Ca2+ stress, an increased energy demand and oxidative stress cause further deterioration of cell bioenergetic capacity, triggering a
pathological cascade. Our data highlight a general principle—that in any disease (from age-related neurodegenerative diseases to lysosomal storage disorders) in which mitochondrial
bioenergetic capacity is impaired, neurons will become more vulnerable to increased energy demand, which may be sufficient to initiate dysregulated calcium signaling and cell death. CHANGE
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Central Google Scholar Download references ACKNOWLEDGEMENTS We would like to thank Prof. Stefan Karlsson for providing us with the GBA1 knockout mouse model. NP was supported by Marie
Sklodowska-Curie Individual Fellowship (Horizon 2020 Grant No. 653434), FZ and MD were supported by Michael J. Fox Foundation Target Validation Grant (Grant ID 12159) and GB and MD by the
GSK/BBSRC CASE PhD studentship (BB/L502145/1). MD was also supported by BBSRC BB/P018726/1. AAR and SNW were part-funded by the UK Medical Research Council grants (G1000709 and MR/N026101/1)
and GM received support from the UK Gauchers Association. SNW received part funding from UK Medical Research Council grants MR/R015325/1, MR/P026494/1 and MR/N019075/1 and from SPARKS
(17UCL01). AAR is also funded by UK Medical Research Council Grants (MR/R015325/1, MR/S009434/1, MR/N026101/1 and MR/S036784/1), Action Medical Research (GN2485) and the Wellcome Trust
Institutional Strategic Support Fund/UCL Therapeutic Acceleration Support (TAS) Fund (ISSF3/H17RCO/TAS004). AUTHOR INFORMATION Author notes * Nicoletta Plotegher Present address: Department
of Biology, University of Padua, 35131, Padua, Italy AUTHORS AND AFFILIATIONS * Cell and Developmental Biology Department, University College London, London, WC1E6XA, UK Nicoletta Plotegher,
Gauri Bhosale, Federico Zambon, Gyorgy Szabadkai & Michael R. Duchen * Institute for Women’s Health, University College London, London, WC1E6HU, UK Dany Perocheau & Simon N.
Waddington * Department of Physics, University of Trento, 38123, Povo (TN), Italy Ruggero Ferrazza & Graziano Guella * School of Pharmacy, University College London, London, WC1N1AX, UK
Giulia Massaro & Ahad A. Rahim * MRC Antiviral Gene Therapy Research Unit, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa Simon N. Waddington *
Department of Biomedical Sciences, University of Padua, 35131, Padua, Italy Gyorgy Szabadkai * The Francis Crick Institute, London, NW1 1AT, UK Gyorgy Szabadkai Authors * Nicoletta Plotegher
View author publications You can also search for this author inPubMed Google Scholar * Dany Perocheau View author publications You can also search for this author inPubMed Google Scholar *
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CORRESPONDING AUTHOR Correspondence to Michael R. Duchen. ETHICS DECLARATIONS CONFLICT OF INTEREST The authors declare that they have no conflict of interest. ADDITIONAL INFORMATION
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ARTICLE CITE THIS ARTICLE Plotegher, N., Perocheau, D., Ferrazza, R. _et al._ Impaired cellular bioenergetics caused by GBA1 depletion sensitizes neurons to calcium overload. _Cell Death
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